| ARCHETYPE ID | openEHR-EHR-CLUSTER.erregerdetails.v1 |
|---|---|
| Concept | Pathogen details |
| Description | Detailed information about the detected pathogen. |
| Use | Used to record, in addition to the Cluser.Labatory Test Result - Archetypes, for example, germ counts and frequency, subtyping, MRE class for the pathogens detected. |
| Misuse | Do not use this archetype to represent general laboratory test results. |
| Purpose | Use to record additional information or observations on a pathogen detected in the laboratory, e.g. germ count and frequency, subtyping, MRE class, etc. |
| References | |
| Copyright | © HiGHmed |
| Authors | Author name: Sarah Ballout Organisation: MHH-Hanover Email: ballout.sarah@mh-hannover.de Date originally authored: 2020-03-05 |
| Other Details Language | Author name: Sarah Ballout Organisation: MHH-Hanover Email: ballout.sarah@mh-hannover.de Date originally authored: 2020-03-05 |
| Other Details (Language Independent) |
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| Keywords | Pathogen, Germ, Virulence factor, Germ value |
| Lifecycle | in_development |
| UID | f9a8f220-9937-476b-8845-ba616889ebff |
| Language used | en |
| Citeable Identifier | 1246.145.322 |
| Revision Number | 1.1.2-alpha |
| items | |
| Germ subtype | Germ subtype: In addition species identification, this subtype can be used for further identification of the pathogen, e.g. spa type in the case of S. aureus or MLST type. Specific germ subtypes affect the immune response of the host. For example, a result of a spa-typing in S. aureus or other typings like MLST. |
| Germination value | Germination value: Quantitative information about the germ value, e.g. for urines. Property: Flow rate, volume Units: CFU/ml Possible reasons why null:
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| Frequency | Frequency: Semi-quantitative information regarding the germination value. 0: (+) [(+)] 1: + [+] 2: ++ [++] 3: +++ [+++] 4: ++++ [++++] |
| Virulence factor | Virulence factor: Details of the analysed virulence characteristics or genes, e.g. PVL in S. aureus or EHEC in E. coli. |
| Antibiogram | Antibiogram: The name of the antibiogram which has been used to determine the sensitivity or resistance of microbial pathogens to antibiotics. Additional information is recorded in the archetypes "Laboratory Analytical Panel" and "Laboratory Test Panel". Include: openEHR-EHR-CLUSTER.laboratory_ openEHR-EHR-CLUSTER.laboratory_ |
| Resistance mechanism | Resistance mechanism: Information regarding the resistance mechanisms of the pathogen, e.g. ESBL or carbapenemase. |
| Name of the resistance mechanism | Name of the resistance mechanism: The name of the resistance mechanism. For example, the examination of a "Staphylococcus aureus"species, which represents the name of the germ. |
| Specialisation of the resistance mechanism | Specialisation of the resistance mechanism: Further information about the resistance mechanism An example for this is the examination of a "Staphylococcus aureus" species, which represents the name of the germ. In the future, they would like to examine the "toxins" of the "Staphylococcus aureus".In this case the "toxins" would be the specialization of the examined germ. |
| MRE class | MRE class: Specification for the MRE classification of theexciter, e.g. 3MRGN or 4MRGN. In AER and MRSA there can be a redundancy to the resistance mechanism "methicillin resistance", which is not a problem. |
| Comment | Comment: Additional information about the pathogen. |
| Further additions | Further additions: Use this cluster to include further additions to the pathogen details archetype. Include: openEHR-EHR-CLUSTER.address.v0 and specialisations or openEHR-EHR-CLUSTER.adhoc_ openEHR-EHR-CLUSTER.anatomical_ openEHR-EHR-CLUSTER.case_ openEHR-EHR-CLUSTER.conversion_ openEHR-EHR-CLUSTER.death_ openEHR-EHR-CLUSTER.deletion_ openEHR-EHR-CLUSTER.device.v0 and specialisations or openEHR-EHR-CLUSTER.dosage.v0 and specialisations or openEHR-EHR-CLUSTER.duplication_ openEHR-EHR-CLUSTER.dzhk_ openEHR-EHR-CLUSTER.dzhk_ openEHR-EHR-CLUSTER.echocardiography_ openEHR-EHR-CLUSTER.exam_ openEHR-EHR-CLUSTER.exclusion_ openEHR-EHR-CLUSTER.family_ openEHR-EHR-CLUSTER.funktionseinheit.v0 and specialisations or openEHR-EHR-CLUSTER.gender.v0 and specialisations or openEHR-EHR-CLUSTER.histopathology_ openEHR-EHR-CLUSTER.imaging_ openEHR-EHR-CLUSTER.indel_ openEHR-EHR-CLUSTER.insertion_ openEHR-EHR-CLUSTER.inversion_ openEHR-EHR-CLUSTER.issue.v0 and specialisations or openEHR-EHR-CLUSTER.laboratory_ openEHR-EHR-CLUSTER.laboratory_ openEHR-EHR-CLUSTER.level_ openEHR-EHR-CLUSTER.lymph_ openEHR-EHR-CLUSTER.medication.v0 and specialisations or openEHR-EHR-CLUSTER.multimedia.v0 and specialisations or openEHR-EHR-CLUSTER.nyha_ openEHR-EHR-CLUSTER.organisation.v0 and specialisations or openEHR-EHR-CLUSTER.organisationseinheiten.v0 and specialisations or openEHR-EHR-CLUSTER.quality_ openEHR-EHR-CLUSTER.Reference_ openEHR-EHR-CLUSTER.repeated_ openEHR-EHR-CLUSTER.sample_ openEHR-EHR-CLUSTER.sample_ openEHR-EHR-CLUSTER.sample_ openEHR-EHR-CLUSTER.sample_ openEHR-EHR-CLUSTER.Sequence_ openEHR-EHR-CLUSTER.specimen.v0 and specialisations or openEHR-EHR-CLUSTER.specimen_ openEHR-EHR-CLUSTER.substitution_ openEHR-EHR-CLUSTER.symptom_ openEHR-EHR-CLUSTER.therapeutic_ openEHR-EHR-CLUSTER.tnm_ openEHR-EHR-CLUSTER.tumour_ openEHR-EHR-CLUSTER.weitere_ |
| Other contributors | |
| Translators |